BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025A04LP1|AL428308
(932 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1057 1818 0.0
>3x_Contig1057
Length = 3069
Score = 1818 bits (917), Expect = 0.0
Identities = 931/933 (99%), Gaps = 2/933 (0%)
Strand = Plus / Plus
Query: 1 atcctgagtccttaatcagtgttttacagttcaatttctcgccttgttgatctgtcaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atcctgagtccttaatcagtgttttacagttcaatttctcgccttgttgatctgtcaatg 557
Query: 61 tgtattcttgaattgtgttaacattggaaatgcttagatgctcatcaaaatttttcagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tgtattcttgaattgtgttaacattggaaatgcttagatgctcatcaaaatttttcagta 617
Query: 121 cataagagagtagggtaacgatatttgaattccagcgacaggcagttagttactcatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cataagagagtagggtaacgatatttgaattccagcgacaggcagttagttactcatagt 677
Query: 181 ctggagttgactcatacacaggatatacttactagtcttatataccagtgttgtatagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ctggagttgactcatacacaggatatacttactagtcttatataccagtgttgtatagat 737
Query: 241 attctttcaattgggcgaatgctctgccacgctgagagattttgttcttgtcttctttag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 attctttcaattgggcgaatgctctgccacgctgagagattttgttcttgtcttctttag 797
Query: 301 ccatttcggcatacgtttcgttgttttgtgattcatccggttggaagatggaatcccaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ccatttcggcatacgtttcgttgttttgtgattcatccggttggaagatggaatcccaac 857
Query: 361 cgaaattggtgtgacctctactgtcaacgatggttccgtgagtcttaccttggaatacgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 cgaaattggtgtgacctctactgtcaacgatggttccgtgagtcttaccttggaatacgt 917
Query: 421 gtaattggcccttagagtcagcgtatgcgantcgtagtgatcgcgtatgc-cctttattc 479
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 918 gtaattggcccttagagtcagcgtatgcga-tcgtagtgatcgcgtatgcgcctttattc 976
Query: 480 tcgaatgaatcgagcattttcacgactttggcaagccccatcgatttgatgaaccatttg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 tcgaatgaatcgagcattttcacgactttggcaagccccatcgatttgatgaaccatttg 1036
Query: 540 atgtacgcacctggcaacccattgaattcgtcgaatgagagtgcagtatcctcgacgaac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 atgtacgcacctggcaacccattgaattcgtcgaatgagagtgcagtatcctcgacgaac 1096
Query: 600 actggtctaccgggccccaatgcgtggaccgcttgttgcaatttagcaagggcaatttct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 actggtctaccgggccccaatgcgtggaccgcttgttgcaatttagcaagggcaatttct 1156
Query: 660 tgcagatcggcaccttgaagttcttctaaatctaatggttcgttcacaagtgtgaaggga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 tgcagatcggcaccttgaagttcttctaaatctaatggttcgttcacaagtgtgaaggga 1216
Query: 720 gatgcgtccccaccgagaatcatgctcacttctctgagcttgttggcatttcctgtgaca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 gatgcgtccccaccgagaatcatgctcacttctctgagcttgttggcatttcctgtgaca 1276
Query: 780 aagacgatttctggcttaggcatgttgtgggacgtgactgacttggctggtttggctggt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 aagacgatttctggcttaggcatgttgtgggacgtgactgacttggctggtttggctggt 1336
Query: 840 cttccctttgtcggtaggcaacatttctctcgttttctttctctagaatgcaaggttcga 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 cttccctttgtcggtaggcaacatttctctcgttttctttctctagaatgcaaggttcga 1396
Query: 900 tatttaatcagatgagatgagataagatcagcc 932
|||||||||||||||||||||||||||||||||
Sbjct: 1397 tatttaatcagatgagatgagataagatcagcc 1429
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6390
Number of Sequences: 1807
Number of extensions: 6390
Number of successful extensions: 151
Number of sequences better than 1.0e-20: 1
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)